The detailed information of tRNA gene sequence


Sequence ID>WENV170692414
Genome IDLGOV01006572
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 6502
End posion on genome 6414
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaggaaataa
tRNA gene sequence 
GGAGAGATGTCCGAGTTGGCTAAGGGGCACGCCTGGAAAGCGTGTAAGACCGTAAGGTCC
CGCGGGTTCAAGTCCCGCTCTCTCTGCCA
Downstream region at tRNA end position 
tattaaattg
Secondary structure (Cloverleaf model)
>WENV170692414	Ser	GGA
                   a      GCCA tattaaattg
                     G + T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T G
                    T     C G C C C     A
      T G A        G      | | | | |     A
    T       G C C T       G C G G G     C
    G         | | +                 T T
    G       A G G G
      C T A        G     TAAGACCGTAAGGTCCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK