The detailed information of tRNA gene sequence


Sequence ID>WENV170692421
Genome IDLGOV01007028
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 28
End posion on genome 105
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gcccaccaac
tRNA gene sequence 
GTCCCCATCGTCTAGTCTGGTCCAGGACACCGGCCTTTCACGCCGGCAGCACCGGTTCAA
ATCCGGTTGGGGACGCCA
Downstream region at tRNA end position 
aagaatatca
Secondary structure (Cloverleaf model)
>WENV170692421	Glu	TTC
                   c      GCCA aagaatatca
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G G C C     A
    C T G A        C      | | | | |     A
  T         T C T G       A C C G G     C
  G         + | | |                 T T
  G         G G A C
    T C C A        A     CAGC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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