The detailed information of tRNA gene sequence


Sequence ID>WENV170692425
Genome IDLGOV01007166
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 122
End posion on genome 198
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gtacgtttgc
tRNA gene sequence 
GGGGCTGTAGTAGAGTCGGTTACAACATCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
TCCCGTCAGCCCCGCCA
Downstream region at tRNA end position 
tacaaataaa
Secondary structure (Cloverleaf model)
>WENV170692425	Asp	GTC
                   c      GCCA tacaaataaa
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       G A T G       G C G G G     C
    G       |   | |                 T T
    G       C A A C
      T T A        A     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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