The detailed information of tRNA gene sequence


Sequence ID>WENV170692539
Genome IDLGOV01012601
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 408
End posion on genome 333
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gttgatttag
tRNA gene sequence 
GGCGGCATAGCCAAGAGGCTAAGGCAGCGGTCTGCAAAATCGTTATTCATCGGTTCGAAT
CCGATTGCCGCCTCCA
Downstream region at tRNA end position 
gtgaggcata
Secondary structure (Cloverleaf model)
>WENV170692539	Cys	GCA
                   g      TCCA gtgaggcata
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     T A G C C     A
      A G A        A      | | | | |     G
    G       A C C G       A T C G G     C
    G         | | |                 T T
    C       A G G C
      T A          A     TATTC
                    G + T
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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