The detailed information of tRNA gene sequence


Sequence ID>WENV170692623
Genome IDLGOV01016961
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 3012
End posion on genome 3086
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tacctcttga
tRNA gene sequence 
GGGGCCGTAGGGTAGCCTGGACCATCCTGCAAGGCTGGGGGTCTTGTGACCGGAGTTCAA
ATCTCCGCGGCCCCAttc
Downstream region at tRNA end position 
gttttctata
Secondary structure (Cloverleaf model)
>WENV170692623	Pro	GGG
                   a      Attc gttttctata
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G C C T C     A
    C C G A        A      | | | | |     A
  T         T G G G       C G G A G     C
  G           | | +                 T T
  G         T C C T
    A C C A        G     TGAC
                    C - G
                    A - T
                    A - T
                    G - C
                    G + T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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