The detailed information of tRNA gene sequence


Sequence ID>WENV170692636
Genome IDLGOV01018176
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 3214
End posion on genome 3304
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGACAGTTGGGTGAGTTGGCTGAAACCACACCCCTGCTAAGGGTGCATATCCTAACGGGT
ATCGAGAGTTCGAATCTCTCACTGTCCGCCA
Downstream region at tRNA end position 
taccttaaaa
Secondary structure (Cloverleaf model)
>WENV170692636	Ser	GCT
                   n      GCCA taccttaaaa
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     T - A          T A
                    T     C T C T C     A
    T T G A        G      | | | | |     G
  G         G T G G       G A G A G     C
  G           | | |                 T T
  C         A A C C
    T G A          A     CATATCCTAACGGGTATC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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