The detailed information of tRNA gene sequence


Sequence ID>WENV170692650
Genome IDLGOV01019263
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 600
End posion on genome 673
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtatcatata
tRNA gene sequence 
GGGGTCGTGGCCTAGTCCGGAAGGGCAGCGGGCTCCAGACTCGCCGACCGTGCGTTCAAA
TCGCACCGACCCCAttt
Downstream region at tRNA end position 
ttnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170692650	Trp	CCA
                   a      Attt ttnnnnnnnn
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     C A C G C     A
      T G A        G      | | | | |     A
    C       T C C G       G T G C G     C
    C       + | | |                 T T
    G       G G G C
      G A A        A     CGACC
                    G - C
                    C - G
                    G - C
                    G + T
                    G - C
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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