The detailed information of tRNA gene sequence


Sequence ID>WENV170692690
Genome IDLGOV01022187
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 409
End posion on genome 484
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
atgatgctgc
tRNA gene sequence 
AGGCCAGTAGCTCTAACGGTAGAGCGTCGGACTCCAAATCCGGGTGCTGGGGGTTCGAAT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
aatcagcgtt
Secondary structure (Cloverleaf model)
>WENV170692690	Trp	CCA
                   c      GCCA aatcagcgtt
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A T        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     GTGCT
                    T + G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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