The detailed information of tRNA gene sequence


Sequence ID>WENV170692691
Genome IDLGOV01022255
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 7055
End posion on genome 6968
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cccaacctgc
tRNA gene sequence 
GGAGAGGTGACCGAGAGGCCGAAGGTGCACGATTGGAAATCGTGTGTACCGCAAGGTACC
GAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gatttattaa
Secondary structure (Cloverleaf model)
>WENV170692691	Ser	GGA
                   c      GCCA gatttattaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGTACCGCAAGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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