The detailed information of tRNA gene sequence


Sequence ID>WENV170692717
Genome IDLGOV01024455
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 27
End posion on genome 100
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
accatattcc
tRNA gene sequence 
GCGGGTGTAGCTCAGTGGTAGAGCCCTGGCCTTCCAAGCCAGTCGCGAGGGTTCGATTCC
CTCTACCCGCTCCA
Downstream region at tRNA end position 
tatgcgttcg
Secondary structure (Cloverleaf model)
>WENV170692717	Gly	TCC
                   c      TCCA tatgcgttcg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G + T          T T
                    T     C T C C C     A
        G A        A      | | | | |     G
      T     C T C G       G A G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        C     TCGC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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