The detailed information of tRNA gene sequence


Sequence ID>WENV170692733
Genome IDLGOV01025257
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 4289
End posion on genome 4365
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taaaggctga
tRNA gene sequence 
GGTCCTATAGCTCAGTTGGTTAGAGCACCTGACTCATAATCAGGTGGTCCCTGGTTCGAG
TCCAGGTGGGCCCACAA
Downstream region at tRNA end position 
acataaacgg
Secondary structure (Cloverleaf model)
>WENV170692733	Met	CAT
                   a      ACAA acataaacgg
                     G - C
                     G - C
                     T   C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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