The detailed information of tRNA gene sequence


Sequence ID>WENV170692739
Genome IDLGOV01025655
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 147
End posion on genome 221
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgaccaatga
tRNA gene sequence 
GGGCCCGTAGCTTAGGTTGGTTAGAGCGCCCGGCTCATAACCGGGCGGTCAAGGGTTCAA
ATCCCTTCGGGCCCAatc
Downstream region at tRNA end position 
tccaagcatt
Secondary structure (Cloverleaf model)
>WENV170692739	Met	CAT
                   a      Aatc tccaagcatt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T T C C C     A
    T G G A        A      | | | | |     A
  T         T T C G       A A G G G     C
  G         + | | |                 T T
  G         G A G C
    T T A          G     CGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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