The detailed information of tRNA gene sequence


Sequence ID>WENV170692759
Genome IDLGOV01027156
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 525
End posion on genome 601
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
nnnnnnnngt
tRNA gene sequence 
CGGGACGTGGCTCAGTCTGGTAGAGCACCGCGTTCGGGACGCGGGAGTCGCTGGTTCAAA
TCCAGTCGTCCCGACCA
Downstream region at tRNA end position 
ttgatataaa
Secondary structure (Cloverleaf model)
>WENV170692759	Pro	CGG
                   t      ACCA ttgatataaa
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G A C C     A
      T G A        G      + | | | |     A
    C       C T C G       G C T G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GAGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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