The detailed information of tRNA gene sequence


Sequence ID>WENV170692802
Genome IDLGOV01031969
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 1259
End posion on genome 1183
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
tacatcaatt
tRNA gene sequence 
GCGCCAGTAGCTCAGATGGATAGAGCATCTGACTTCGAATCAGAGGGCCGGGAGTTCGAG
TCTCTCCTGGCGCACCA
Downstream region at tRNA end position 
tttacatttt
Secondary structure (Cloverleaf model)
>WENV170692802	Arg	TCG
                   t      ACCA tttacatttt
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C T C     A
      A G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGCC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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