The detailed information of tRNA gene sequence


Sequence ID>WENV170692811
Genome IDLGOV01033101
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 460
End posion on genome 385
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tgcgggcttt
tRNA gene sequence 
GCCAGCGTAGCTCAGGTGGTAGAGCAACTGATTTGTAATCAGTGGGTCGGGGGTTCGAAT
CCCTCCGCTGGCTTCA
Downstream region at tRNA end position 
tgttcaggac
Secondary structure (Cloverleaf model)
>WENV170692811	Thr	TGT
                   t      TTCA tgttcaggac
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
      G G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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