The detailed information of tRNA gene sequence


Sequence ID>WENV170692815
Genome IDLGOV01033682
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 8227
End posion on genome 8154
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
acaacgtcat
tRNA gene sequence 
GGCCCCGTCGCCAAGTGGTAAGGCAGAGGCCTGCAAAGCCTTTATCCCCAGTTCGAATCT
GGGCGGGGCCTCCA
Downstream region at tRNA end position 
aataaaaaaa
Secondary structure (Cloverleaf model)
>WENV170692815	Cys	GCA
                   t      TCCA aataaaaaaa
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G G T C     A
        G A        C      | | | | |     G
      T     A C C G       C C C A G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATC
                    G + T
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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