The detailed information of tRNA gene sequence


Sequence ID>WENV170692869
Genome IDLGOV01039102
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 1403
End posion on genome 1490
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
taaatgctac
tRNA gene sequence 
GGAGGGGTGTCCGAGAGGTCGAAGGTGACAGACTCGAAATCTGTTGTACTGCAAGGTACC
GTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
gtaaaaataa
Secondary structure (Cloverleaf model)
>WENV170692869	Ser	CGA
                   c      GCCA gtaaaaataa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      A G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | |                   T T
    T       A G G T
      C G A        G     TGTACTGCAAGGTACC
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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