The detailed information of tRNA gene sequence


Sequence ID>WENV170692873
Genome IDLGOV01039405
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 260
End posion on genome 184
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
attcggtctt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCGCCTGGTTTGGGACCAGGATGTCGGAGGTTCGAA
TCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
tttttacaca
Secondary structure (Cloverleaf model)
>WENV170692873	Pro	TGG
                   t      ACCA tttttacaca
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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