The detailed information of tRNA gene sequence


Sequence ID>WENV170692881
Genome IDLGOV01040354
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 1111
End posion on genome 1188
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tatataaagT
tRNA gene sequence 
AGCGGGGTAGGGTAGTTAGGATATCCCGTCGGGCTCATAACCCGGAGACCGGTGGTTCGA
ATCCATCCCCCGCTATCg
Downstream region at tRNA end position 
ttcgtttccc
Secondary structure (Cloverleaf model)
>WENV170692881	Met	CAT
                   T      ATCg ttcgtttccc
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T A C C     A
    T T G A        A      | + | | |     G
  A         T G G G       G G T G G     C
  G           | | |                 T T
  G         T C C C
    A T A          G     AGACC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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