The detailed information of tRNA gene sequence


Sequence ID>WENV170692882
Genome IDLGOV01040792
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 152
End posion on genome 78
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
aaaagaaata
tRNA gene sequence 
GCTCCGCTGGTGTAGTTCGGCCAAGCATGCGGGCCTCTCGAGCCCACGACCGGGGTTCAA
ATCCCCGGCGGAGCAtga
Downstream region at tRNA end position 
ttatagcacg
Secondary structure (Cloverleaf model)
>WENV170692882	Glu	CTC
                   a      Atga ttatagcacg
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     C - G          T A
                    T     G C C C C     A
    T T G A        G      | | | | |     A
  C         T G T G       C G G G G     C
  G         + | | +                 T T
  G         G C A T
    C C A A        G     CGAC
                    C   A
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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