The detailed information of tRNA gene sequence


Sequence ID>WENV170692919
Genome IDLGOV01045973
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 1247
End posion on genome 1172
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ctccacgttt
tRNA gene sequence 
GGGCGAATAGCTCAGCTGGGAGAGCATCGGTCTTACACACCGAGGGTCACAGGTTCGAGC
CCTGTTTCGCCCACCA
Downstream region at tRNA end position 
aacatttcaa
Secondary structure (Cloverleaf model)
>WENV170692919	Val	TAC
                   t      ACCA aacatttcaa
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T          C G
                    T     T G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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