The detailed information of tRNA gene sequence


Sequence ID>WENV170692928
Genome IDLGOV01048067
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 499
End posion on genome 425
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
atagaacgta
tRNA gene sequence 
GGGGTCGTGGCCTAGTCCGGAAGGGCAGCGGGCTCCAGACTCGCCGATCGTGCGTTCAAA
TCGCACCGACCCCACtt
Downstream region at tRNA end position 
aattttttgt
Secondary structure (Cloverleaf model)
>WENV170692928	Trp	CCA
                   a      ACtt aattttttgt
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     C A C G C     A
      T G A        G      | | | | |     A
    C       T C C G       G T G C G     C
    C       + | | |                 T T
    G       G G G C
      G A A        A     CGATC
                    G - C
                    C - G
                    G - C
                    G + T
                    G - C
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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