The detailed information of tRNA gene sequence


Sequence ID>WENV170692968
Genome IDLGOV01053479
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 203
End posion on genome 110
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cagcttatac
tRNA gene sequence 
GGAGGAATACCCAAGTCCGGCTGAAGGGATCAGTCTTGAAAACTGACAGGGCGTTTATAG
CGCCGCGGGGGTTCGAATCCCTCTTCCTCCGCCA
Downstream region at tRNA end position 
ttactttttt
Secondary structure (Cloverleaf model)
>WENV170692968	Ser	TGA
                   c      GCCA ttactttttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     C T C C C     A
    C T G A        A      | + | | |     G
  C         A C C C       G G G G G     C
  G           | | |                 T T
  G         A G G G
    C T G A        A     CAGGGCGTTTATAGCGCCGC
                    T - A
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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