The detailed information of tRNA gene sequence


Sequence ID>WENV170693059
Genome IDLGOV01072453
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 1162
End posion on genome 1236
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tccatttgtt
tRNA gene sequence 
GGCCCCATCGTCTAGCGGTTAGGATCCATGGTTTTCATCCATGTTACCGGAGTTCGAGTC
TCCGTGGGGTCACCA
Downstream region at tRNA end position 
cttcaacttt
Secondary structure (Cloverleaf model)
>WENV170693059	Glu	TTC
                   t      ACCA cttcaacttt
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     G C C T C     A
      C G A        C      | | | | |     G
    G       T C T G       C G G A G     C
    G       + | | +                 T T
    T       G G A T
      T A          C     TTAC
                    C - G
                    A - T
                    T - A
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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