The detailed information of tRNA gene sequence


Sequence ID>WENV170693066
Genome IDLGOV01073029
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 395
End posion on genome 492
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
agttatattc
tRNA gene sequence 
GGAAGTGGAAAGCTCACTGGTGGGGCTCCCGGACTTCAAATCCGGTGTGCCGGGCTAAAC
CCTCGGCAGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
catgtaaatt
Secondary structure (Cloverleaf model)
>WENV170693066	SeC(p)	TCA
                   c      GCCA catgtaaatt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T A C C C     A
      C A C        A      + | | | |     G
    T       T C G A       G T G G G     C
    G       + | | |                 T T
    G       G G C T
      T G G        C     TGTGCCGGGCTAAACCCTCGGCAG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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