The detailed information of tRNA gene sequence


Sequence ID>WENV170693079
Genome IDLGOV01077366
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 1723
End posion on genome 1797
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
acattctttT
tRNA gene sequence 
GGTCCCATCGTCTAGCGGTTTAGGATGTCGGCCTCTCACGCCGGAGACACGGGTTCGATT
CCCGTTGGGACTATtt
Downstream region at tRNA end position 
aactatagat
Secondary structure (Cloverleaf model)
>WENV170693079	Glu	CTC
                   T      ATtt aactatagat
                     G + T
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | +                 T T
    T       G G A T
      T T A        G     AGAC
                    T + G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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