The detailed information of tRNA gene sequence


Sequence ID>WENV170693092
Genome IDLGOV01082037
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 1178
End posion on genome 1103
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtataataat
tRNA gene sequence 
AGGCGTATAGCTCCAATGGTAGAGCACCGGATTCCAAATCCGGGTGTTGGGAGTTCGAGT
CTCTCTACGCCTGCCA
Downstream region at tRNA end position 
ctaaaacaaa
Secondary structure (Cloverleaf model)
>WENV170693092	Trp	CCA
                   t      GCCA ctaaaacaaa
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     A - T          T G
                    T     C T C T C     A
      A A C        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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