The detailed information of tRNA gene sequence


Sequence ID>WENV170693115
Genome IDLGOV01089997
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 3320
End posion on genome 3396
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
agtccatctt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCGCCTGGTTTGGGACCAGGATGTCGGAGGTTCGAA
TCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
tttttatact
Secondary structure (Cloverleaf model)
>WENV170693115	Pro	TGG
                   t      ACCA tttttatact
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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