The detailed information of tRNA gene sequence


Sequence ID>WENV170693118
Genome IDLGOV01090710
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 2293
End posion on genome 2367
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
gttcttgttT
tRNA gene sequence 
GGGCCCGTAGGGTAGCTTGGCATCCTTGTACCTTGGGGTGGTATAGACTTGAGTTCAAAT
CTCAGCGGGCCCATac
Downstream region at tRNA end position 
atatttacgg
Secondary structure (Cloverleaf model)
>WENV170693118	Pro	GGG
                   T      ATac atatttacgg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G A C T C     A
      C G A        A      + | | | |     A
    T       T G G G       T T G A G     C
    T         | | +                 T T
    G       T C C T
      G C A        T     AGAC
                    G + T
                    T - A
                    A - T
                    C - G
                    C - G
                  T       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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