The detailed information of tRNA gene sequence


Sequence ID>WENV170693129
Genome IDLGOV01094908
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 1789
End posion on genome 1715
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
tcatgatcat
tRNA gene sequence 
TCCGGATTAGCTCAGCGGTAGAGTAGGTGACTGTTAATCACTTGGTCACTGGTTCGAATC
CAGTATCCGGAGCCA
Downstream region at tRNA end position 
ttacttttca
Secondary structure (Cloverleaf model)
>WENV170693129	Asn	GTT
                   t      GCCA ttacttttca
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T G A C C     A
        G A        A      | | | | |     G
      C     C T C G       A C T G G     C
      G     | | | +                 T T
      G     G A G T
        T A        A     TGGTC
                    G + T
                    G - C
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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