The detailed information of tRNA gene sequence


Sequence ID>WENV170693138
Genome IDLGOV01099470
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 331
End posion on genome 424
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnntatttac
tRNA gene sequence 
GGAGAGATGTCCGAGCTGGCCGAAGGAGCGCGACTGGAAATCGCGTGTACTACTAATAGT
GGTACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
attatacacg
Secondary structure (Cloverleaf model)
>WENV170693138	Ser	GGA
                   c      GCCA attatacacg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G C C T       G A G G G     C
  G           | | |                 T T
  C         A G G A
    C G A          G     TGTACTACTAATAGTGGTACC
                    C - G
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK