The detailed information of tRNA gene sequence


Sequence ID>WENV170693141
Genome IDLGOV01101416
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 3432
End posion on genome 3507
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcgcaaatat
tRNA gene sequence 
CGCGGGGTAGAGCAGTAGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCTGGTTCGAGT
CCAGTCCCCGCTACTA
Downstream region at tRNA end position 
aatttttgtt
Secondary structure (Cloverleaf model)
>WENV170693141	Met	CAT
                   t      ACTA aatttttgtt
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     T G A C C     A
      T G A        A      + | | | |     G
    A       C G A G       G C T G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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