The detailed information of tRNA gene sequence


Sequence ID>WENV170693155
Genome IDLGOV01110145
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 137
End posion on genome 224
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gagatagggT
tRNA gene sequence 
GCCAGGGTGGCAGAGTGGACAAATGCGGTGGCCTCGAGAGTCACTGTCCCTTTTGGGACG
CTCAGGTTCAAATCCTGACCCTGGCGTaa
Downstream region at tRNA end position 
ggttcgcttt
Secondary structure (Cloverleaf model)
>WENV170693155	Ser	CGA
                   T      GTaa ggttcgcttt
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     A G T C C     A
      T G A        G      | | | | |     A
    G       G A C G       T C A G G     C
    G         | | |                 T T
    A       A T G C
      C A A        G     TGTCCCTTTTGGGACGC
                    G - C
                    T - A
                    G - C
                    G + T
                    C - G
                  C       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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