The detailed information of tRNA gene sequence


Sequence ID>WENV170693233
Genome IDLGOV01182986
Search identical group
Phylum/Class[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
Species
Start position on genome 364
End posion on genome 438
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
actggtactc
tRNA gene sequence 
GGGCGGTTAGCTCAGCGGGAGAGCATTCGCCTCACACGCGAAGGGTCCGGGGTTCGATCC
CCCGACCGCCCACCA
Downstream region at tRNA end position 
attattttca
Secondary structure (Cloverleaf model)
>WENV170693233	Val	CAC
                   c      ACCA attattttca
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C T
                    T     G C C C C     A
        G A        A      | | | | |     G
      C     C T C G       C G G G G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     GGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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