The detailed information of tRNA gene sequence


Sequence ID>WENV170693247
Genome IDLGVC01000060
Search identical group
Phylum/Class[LGVC] marine sediment metagenome; sample #5133, Elevator 3A push core 47, collected at Hydrate Ridge North during Jason II dive
Species
Start position on genome 2373
End posion on genome 2465
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ggccttgcga
tRNA gene sequence 
GGAGAGGTTGCCGAGTGGCTGAAGGCCCCGCTCTCGAAAAGCGGTATCCTGTGAATAACG
GGATCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
caaaaaatca
Secondary structure (Cloverleaf model)
>WENV170693247	Ser	CGA
                   a      GCCA caaaaaatca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        T      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        C     TATCCTGTGAATAACGGGATC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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