The detailed information of tRNA gene sequence


Sequence ID>WENV170693248
Genome IDLGVC01000060
Search identical group
Phylum/Class[LGVC] marine sediment metagenome; sample #5133, Elevator 3A push core 47, collected at Hydrate Ridge North during Jason II dive
Species
Start position on genome 2492
End posion on genome 2585
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaagaacccc
tRNA gene sequence 
GGAGAGATGTCCGAGCTGGTTGAAGGAGCACGACTGGAAATCGTGTGTACTGTCAAAAGC
GGTACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ggaatttttt
Secondary structure (Cloverleaf model)
>WENV170693248	Ser	GGA
                   c      GCCA ggaatttttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G C C T       G A G G G     C
  G           | | |                 T T
  T         A G G A
    T G A          G     TGTACTGTCAAAAGCGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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