The detailed information of tRNA gene sequence


Sequence ID>WENV170693259
Genome IDLGVC01000317
Search identical group
Phylum/Class[LGVC] marine sediment metagenome; sample #5133, Elevator 3A push core 47, collected at Hydrate Ridge North during Jason II dive
Species
Start position on genome 247
End posion on genome 170
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ccactaccct
tRNA gene sequence 
GTCCCCATCGTCTAGTCTGGTCCAGGACACCGGCCTTTCACGCCGGCAGCACCGGTTCAA
ATCCGGTTGGGGACGCCA
Downstream region at tRNA end position 
ctgatacccg
Secondary structure (Cloverleaf model)
>WENV170693259	Glu	TTC
                   t      GCCA ctgatacccg
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G G C C     A
    C T G A        C      | | | | |     A
  T         T C T G       A C C G G     C
  G         + | | |                 T T
  G         G G A C
    T C C A        A     CAGC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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