The detailed information of tRNA gene sequence


Sequence ID>WENV170693306
Genome IDLGVC01001748
Search identical group
Phylum/Class[LGVC] marine sediment metagenome; sample #5133, Elevator 3A push core 47, collected at Hydrate Ridge North during Jason II dive
Species
Start position on genome 6543
End posion on genome 6446
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tcttcataat
tRNA gene sequence 
GGAAGTGGATAGCTCACTGGTGGAGCTCCCGGACTTCAAATCCGGTGTGGGGCGTTAACA
CCGTCTCGGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
acggtttgca
Secondary structure (Cloverleaf model)
>WENV170693306	SeC(p)	TCA
                   t      GCCA acggtttgca
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T A C C C     A
      C A C        T      + | | | |     G
    T       T C G A       G T G G G     C
    G       | | | |                 T T
    G       A G C T
      T G G        C     TGTGGGGCGTTAACACCGTCTCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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