The detailed information of tRNA gene sequence


Sequence ID>WENV170693311
Genome IDLGVC01002234
Search identical group
Phylum/Class[LGVC] marine sediment metagenome; sample #5133, Elevator 3A push core 47, collected at Hydrate Ridge North during Jason II dive
Species
Start position on genome 369
End posion on genome 443
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcttccaagg
tRNA gene sequence 
GGGCCTATAGCTTAGTCAGGTTAGAGCGCCCGGCTCATAACCGGGCGGTCACCGGTTCAA
ATCCGGTTAGGCCCAtat
Downstream region at tRNA end position 
cgcctggtat
Secondary structure (Cloverleaf model)
>WENV170693311	Met	CAT
                   g      Atat cgcctggtat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T A
                    T     T G G C C     A
    C T G A        A      | | | | |     A
  A         T T C G       A C C G G     C
  G         + | | |                 T T
  G         G A G C
    T T A          G     CGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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