The detailed information of tRNA gene sequence


Sequence ID>WENV170693361
Genome IDLGVC01004526
Search identical group
Phylum/Class[LGVC] marine sediment metagenome; sample #5133, Elevator 3A push core 47, collected at Hydrate Ridge North during Jason II dive
Species
Start position on genome 2029
End posion on genome 2105
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
aagacattag
tRNA gene sequence 
CGGGATGTGGCGCAGTCTGGTAGCGCGTACGGTTCGGGACCGTAAGGTCGGAGGTTCAAA
TCCTCTCATCCCGACCA
Downstream region at tRNA end position 
gtttccaagg
Secondary structure (Cloverleaf model)
>WENV170693361	Pro	CGG
                   g      ACCA gtttccaagg
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T C T C C     A
      T G A        G      + | | | |     A
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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