The detailed information of tRNA gene sequence


Sequence ID>WENV170693363
Genome IDLGVC01004601
Search identical group
Phylum/Class[LGVC] marine sediment metagenome; sample #5133, Elevator 3A push core 47, collected at Hydrate Ridge North during Jason II dive
Species
Start position on genome 1420
End posion on genome 1347
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtatcatata
tRNA gene sequence 
GGGGTCGTGGCCTAGTCCGGAAGGGCAGCGGGCTCCAGACTCGCCGACCGTGCGTTCAAA
TCGCACCGACCCCAttt
Downstream region at tRNA end position 
ttgcttttcc
Secondary structure (Cloverleaf model)
>WENV170693363	Trp	CCA
                   a      Attt ttgcttttcc
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     C A C G C     A
      T G A        G      | | | | |     A
    C       T C C G       G T G C G     C
    C       + | | |                 T T
    G       G G G C
      G A A        A     CGACC
                    G - C
                    C - G
                    G - C
                    G + T
                    G - C
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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