The detailed information of tRNA gene sequence


Sequence ID>WENV170693380
Genome IDLGVC01005526
Search identical group
Phylum/Class[LGVC] marine sediment metagenome; sample #5133, Elevator 3A push core 47, collected at Hydrate Ridge North during Jason II dive
Species
Start position on genome 22057
End posion on genome 21965
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gttatactgt
tRNA gene sequence 
GGAGAGATGGCCGAGTCGGCTGAAGGCGCTCGCCTGCTAAGCGAGTGTGGGGGGAAACTT
CCACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttctttcttg
Secondary structure (Cloverleaf model)
>WENV170693380	Ser	GCT
                   t      GCCA ttctttcttg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    C T G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TGTGGGGGGAAACTTCCACC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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