The detailed information of tRNA gene sequence


Sequence ID>WENV170693399
Genome IDLGVC01007024
Search identical group
Phylum/Class[LGVC] marine sediment metagenome; sample #5133, Elevator 3A push core 47, collected at Hydrate Ridge North during Jason II dive
Species
Start position on genome 326
End posion on genome 416
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGACAGTTGGGTGAGTTGGCTGAAACCACACCCCTGCTAAGGGTGCATATCCTAACGGGT
ATCGAGAGTTCGAATCTCTCACTGTCCGCCA
Downstream region at tRNA end position 
tacttttaaa
Secondary structure (Cloverleaf model)
>WENV170693399	Ser	GCT
                   n      GCCA tacttttaaa
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     T - A          T A
                    T     C T C T C     A
    T T G A        G      | | | | |     G
  G         G T G G       G A G A G     C
  G           | | |                 T T
  C         A A C C
    T G A          A     CATATCCTAACGGGTATC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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