The detailed information of tRNA gene sequence


Sequence ID>WENV170693476
Genome IDLGVC01013098
Search identical group
Phylum/Class[LGVC] marine sediment metagenome; sample #5133, Elevator 3A push core 47, collected at Hydrate Ridge North during Jason II dive
Species
Start position on genome 1116
End posion on genome 1192
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
atacatctgc
tRNA gene sequence 
AGGCCAGTAGCTCCAACGGTTAGAGCACCGGACTCCAAATCCGGGTGGTGTGGGTTCGAA
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
acgtatattt
Secondary structure (Cloverleaf model)
>WENV170693476	Trp	CCA
                   c      GCCA acgtatattt
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A C        A      |   | | |     G
    C       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGGT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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