The detailed information of tRNA gene sequence


Sequence ID>WENV170693503
Genome IDLGVC01016033
Search identical group
Phylum/Class[LGVC] marine sediment metagenome; sample #5133, Elevator 3A push core 47, collected at Hydrate Ridge North during Jason II dive
Species
Start position on genome 2096
End posion on genome 2173
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tattacaaag
tRNA gene sequence 
GGGCCCGTAGCTTAGTACGGTTAGAGCGCCCGGCTCATAACCGGGCGGCCAAGGGTTCAA
ATCCCTTCGGGCCCACTA
Downstream region at tRNA end position 
taaacccttt
Secondary structure (Cloverleaf model)
>WENV170693503	Met	CAT
                   g      ACTA taaacccttt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T T C C C     A
    A T G A        A      | | | | |     A
  C         T T C G       A A G G G     C
  G         + | | |                 T T
  G         G A G C
    T T A          G     CGGCC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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