The detailed information of tRNA gene sequence


Sequence ID>WENV170693517
Genome IDLGVC01017308
Search identical group
Phylum/Class[LGVC] marine sediment metagenome; sample #5133, Elevator 3A push core 47, collected at Hydrate Ridge North during Jason II dive
Species
Start position on genome 159
End posion on genome 86
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
taataacact
tRNA gene sequence 
GCCTCGGTAGCTTAGCCTGGATGAGCGATTGACTTGTAATCAGTAGGTCGAGGGTTCAAA
TCCCTCCCGAGGCTttc
Downstream region at tRNA end position 
tttgtacgtc
Secondary structure (Cloverleaf model)
>WENV170693517	Thr	TGT
                   t      Tttc tttgtacgtc
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | | | | |     A
    C       T T C G       G A G G G     C
    T       + | | |                 T T
    G       G A G C
      G A T        G     AGGTC
                    A - T
                    T + G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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