The detailed information of tRNA gene sequence


Sequence ID>WENV170693528
Genome IDLGVC01017958
Search identical group
Phylum/Class[LGVC] marine sediment metagenome; sample #5133, Elevator 3A push core 47, collected at Hydrate Ridge North during Jason II dive
Species
Start position on genome 473
End posion on genome 549
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gatcttcggt
tRNA gene sequence 
CGGGACGTGGCTCAGTCTGGTAGAGCACAGCGTTCGGGACGCTGGGGTCGGAGGTTCAAA
TCCTCTCGTCCCGACCA
Downstream region at tRNA end position 
gtttgttttt
Secondary structure (Cloverleaf model)
>WENV170693528	Pro	CGG
                   t      ACCA gtttgttttt
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C T C C     A
      T G A        G      + | | | |     A
    C       C T C G       G G A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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