The detailed information of tRNA gene sequence


Sequence ID>WENV170693540
Genome IDLGVC01019480
Search identical group
Phylum/Class[LGVC] marine sediment metagenome; sample #5133, Elevator 3A push core 47, collected at Hydrate Ridge North during Jason II dive
Species
Start position on genome 697
End posion on genome 621
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caataaatga
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTCGAA
TCCAGCCCCCGCTACCA
Downstream region at tRNA end position 
aaaaacaaga
Secondary structure (Cloverleaf model)
>WENV170693540	Met	CAT
                   a      ACCA aaaaacaaga
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      T G A        G      | + | | |     G
    C       C G A G       G T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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