The detailed information of tRNA gene sequence


Sequence ID>WENV170693586
Genome IDLGVC01024407
Search identical group
Phylum/Class[LGVC] marine sediment metagenome; sample #5133, Elevator 3A push core 47, collected at Hydrate Ridge North during Jason II dive
Species
Start position on genome 281
End posion on genome 357
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
attgttgtgc
tRNA gene sequence 
AGGCCAGTAGCTCTAATTGGTAGAGCATCGGACTCCAAATCCGAGGGCTGGGGGTTCGAG
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
gttaagtgtt
Secondary structure (Cloverleaf model)
>WENV170693586	Trp	CCA
                   c      GCCA gttaagtgtt
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      A A T        A      | + | | |     G
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGCT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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