The detailed information of tRNA gene sequence


Sequence ID>WENV170693678
Genome IDLGVC01040881
Search identical group
Phylum/Class[LGVC] marine sediment metagenome; sample #5133, Elevator 3A push core 47, collected at Hydrate Ridge North during Jason II dive
Species
Start position on genome 546
End posion on genome 620
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
gttcttgttT
tRNA gene sequence 
GGGCCCGTAGGGTAGCTTGGCATCCTTGTACCTTGGGGTGGTATAGACTTGAGTTCAAAT
CTCAGCGGGCCCATac
Downstream region at tRNA end position 
atatttacgg
Secondary structure (Cloverleaf model)
>WENV170693678	Pro	GGG
                   T      ATac atatttacgg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G A C T C     A
      C G A        A      + | | | |     A
    T       T G G G       T T G A G     C
    T         | | +                 T T
    G       T C C T
      G C A        T     AGAC
                    G + T
                    T - A
                    A - T
                    C - G
                    C - G
                  T       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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